PhD Theses

March 23, 2021. Maël Conan (Dyliss) Constructing xenobiotic enriched maps of metabolism to predict the role of enzymes in DNA adduct formation
February 24, 2021. Hugo Talibart (Dyliss) Comparison of homologous protein sequences using direct coupling information by pairwise Potts model alignments
January 5, 2021. Ian Jantet (Druid) Hierarchical and temporal analyses of scientific corpora as tools for the history of science

December 17, 2020. Thi To Quyen Tran (Shaman) Filters based fuzzy big joins
December 17, 2020. Tompoariniaina “Napoun” Andriamilanto (Druid) Leveraging Browser Fingerprinting for Web Authentication
December 16, 2020. Méline Wery (Dyliss) Identification of causal pathological signatures by multi-omic data integration
December 11, 2020. Wesley Delage (Genscale) Characterization and detection of large constitutional genomic insertions for medical use
December 4, 2020. Lolita Lecompte (Genscale) Genotyping structural variations using long-read sequencing data
November 26, 2020. Marine Louarn (Dyliss) Analysis and integration of large, heterogeneous genomic data
November 20, 2020. Colin Leverger (Lacodam) Investigations on a framework for seasonal time series forecasting
October 13, 2020. Kevin Fauvel (Lacodam) Enhancing Performance and Explainability of Multivariate Time Series Machine Learning Methods: Applications for Social Impact in Dairy Resource Monitoring and Earthquake Early Warning
October 1, 2020. Joris Dugueperoux (Druid) Protecting workers on crowdsourcing platforms: a technical perspective
February 3, 2020. Na Li (Druid) Combination of supervised and unsupervised classifiers based on belief functions
February 3, 2020. Yiru Zhang (Druid) Modeling and managing imperfect preferences with belief functions theory

December 19, 2019. Alban Siffer (Lacodam/EmSec) New Statistical Methods for Data Mining: Contributions to Anomaly Detection and Unimodality Testing
December 17, 2019. Lucas Bourneuf (Dyliss) A search space of graph motifs for graph compression: from Powergraphs to triplet concepts
December 16, 2019. Maël Guillemé (Lacodam) Extraction of interpretable knowledge from time series
May 22, 2019. Salma Ben Dhaou (Druid) Modeling interactions between nodes in a credibilist social network
2019. Trung-Dung Le (Shaman) Federation of cloud computing for big data management

November 19, 2018. Clémence Frioux (Dyliss) Investigating host-microbiota cooperation with gap-filling optimization problems
October 16, 2018. Clément Gautrais (Lacodam) Signatures: detecting and characterizing complex recurrent behavior in sequential data
September 28, 2018. Camille Marchet (Genscale) From reads to transcripts: de novo methods for the analysis of transcriptome second and third generation sequencing
April 13, 2018. Yann Dauxais (Lacodam, Druid) Discriminant chronicle mining
2018. Sara El Hassad (Shaman) Learning Commonalities in RDF and SPARQL
2018. Aurélien Moreau (Shaman) How Fuzzy Set Theory can Help Make Database Systems More Cooperative

Olfa Slama (Shaman) Flexible Querying of RDF Databases: A Contribution Based on Fuzzy Logic
Hoang Son Pham (Genscale) Novel Pattern Mining Techniques for Genome-wide Association Studies
Jean Coquet (Dyliss) Exhaustive study of large signaling pathways by trajectory clustering and characterization by semantic analysis
Dorra Attiaoui (Druid) Belief Detection and Temporal Analysis of Experts in Question Answering Communities: case study Stack Overflow
Gaëtan Benoit (Genscale) Large-scale de novo metagenomics comparison

Siwar Jendoubi (Druid) Influencers characterization in a social network for viral marketing perspectives
Aymeric Antoine-Lorquin (Dyliss) The benefit of grammatical models for motif recognition in genomic sequences
William Correa Beltran (Shaman) Discovering and exploiting analogical proportions in a relational database context
Kuang Zhou (Druid) Belief relational clustering and its application to community detection

Vincent Picard (Dyliss) Reaction networks: from probabilistic analysis to refutation
Mathilde Le Boudic-Jamin (Genscale) Similarities and divergences, global and local, between protein structures
Francois Moreews (Genscale) Designing and sharing data analysis workflows: Application to intensive bioinformatics processing
Clovis Galiez (Dyliss) Structural fragments: comparison, predictability from sequence, and application to viral protein identification
Mouhamadou Ba (Semlis) Service composition guided by data: application to bioinformatics data analysis workflows
Amira Essaid (Druid) Decision Making for Ontology Matching under the Theory of Belief Functions